From 39662da000bd2453c0995c3ce35b6e2b3f0e5629 Mon Sep 17 00:00:00 2001
From: Maria Voigt <maria.voigt@idiv.de>
Date: Sun, 19 Feb 2017 11:34:11 +0100
Subject: [PATCH] changing indir and the name and in the last line indir_path
because indir = outdir, but -i=indir is more consistent
---
src/pipeline/submit_pipeline_model.sh | 8 ++++----
1 file changed, 4 insertions(+), 4 deletions(-)
diff --git a/src/pipeline/submit_pipeline_model.sh b/src/pipeline/submit_pipeline_model.sh
index c16912c..326a5f5 100644
--- a/src/pipeline/submit_pipeline_model.sh
+++ b/src/pipeline/submit_pipeline_model.sh
@@ -6,9 +6,9 @@
# here somehow write the prefix depending on what we are testing
-JOB_NAME_PREFIX=ppln_ae75m_50_ac
+JOB_NAME_PREFIX=ppln_ae75m_80
-INPUT_PATH='/work/voigtma/ppln_ae75m_50_ac-2017-02-15T14-23-58'
+INPUT_PATH='/work/voigtma/ppln_ae75m_80-2017-02-18T22-34-53'
NAME=$JOB_NAME_PREFIX-$(date +%FT%H-%M-%S)
OUTPUT_PATH=$INPUT_PATH
@@ -24,7 +24,7 @@ QSUB="qsub -terse -v OUTPUT_PATH=$OUTPUT_PATH -o /work/$USER/$NAME.log -j y"
MODEL_JOB_ID_FITTING=$($QSUB \
-N ${JOB_NAME_PREFIX}_fitting \
- $HOME/orangutan_density_distribution/src/model_fitting/submit_abundance_model_ac_term.sh \
+ $HOME/orangutan_density_distribution/src/model_fitting/submit_abundance_model.sh \
-i $INPUT_PATH \
--ESW-aerial 0.075 \
--include-aerial \
@@ -37,5 +37,5 @@ QSUB="qsub -terse -v OUTPUT_PATH=$OUTPUT_PATH -o /work/$USER/$NAME.log -j y"
-hold_jid $MODEL_JOB_ID_FITTING \
-t 1999:2015 \
$HOME/orangutan_density_distribution/src/prediction/submit_abundance_pred.sh \
- -i $OUTPUT_PATH )
+ -i $INPUT_PATH )
--
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