From 9f4cbb33687eaeefec7d5e387d91d0c8d3874640 Mon Sep 17 00:00:00 2001
From: Maria Voigt <maria.voigt@idiv.de>
Date: Sat, 18 Feb 2017 12:19:13 +0100
Subject: [PATCH] changing folder and names
---
src/pipeline/submit_pipeline_model.sh | 10 +++++-----
1 file changed, 5 insertions(+), 5 deletions(-)
diff --git a/src/pipeline/submit_pipeline_model.sh b/src/pipeline/submit_pipeline_model.sh
index 454f458..c16912c 100644
--- a/src/pipeline/submit_pipeline_model.sh
+++ b/src/pipeline/submit_pipeline_model.sh
@@ -6,12 +6,12 @@
# here somehow write the prefix depending on what we are testing
-JOB_NAME_PREFIX=ppln_noa_50_ac
+JOB_NAME_PREFIX=ppln_ae75m_50_ac
-INPUT_PATH='/work/voigtma/ppln_noae_50_ac-2017-02-09T18-31-21'
+INPUT_PATH='/work/voigtma/ppln_ae75m_50_ac-2017-02-15T14-23-58'
NAME=$JOB_NAME_PREFIX-$(date +%FT%H-%M-%S)
-OUTPUT_PATH=/work/$USER/$NAME
+OUTPUT_PATH=$INPUT_PATH
# qsub -v means that OUTPUT_PATH goes into environment (normally export, but with qsub different)
QSUB="qsub -terse -v OUTPUT_PATH=$OUTPUT_PATH -o /work/$USER/$NAME.log -j y"
@@ -27,6 +27,7 @@ QSUB="qsub -terse -v OUTPUT_PATH=$OUTPUT_PATH -o /work/$USER/$NAME.log -j y"
$HOME/orangutan_density_distribution/src/model_fitting/submit_abundance_model_ac_term.sh \
-i $INPUT_PATH \
--ESW-aerial 0.075 \
+ --include-aerial \
--stability)
@@ -36,6 +37,5 @@ QSUB="qsub -terse -v OUTPUT_PATH=$OUTPUT_PATH -o /work/$USER/$NAME.log -j y"
-hold_jid $MODEL_JOB_ID_FITTING \
-t 1999:2015 \
$HOME/orangutan_density_distribution/src/prediction/submit_abundance_pred.sh \
- -i $OUTPUT_PATH \
- -q)
+ -i $OUTPUT_PATH )
--
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