From d5badd658b730fb9810879c4bbe350fa660ae80b Mon Sep 17 00:00:00 2001
From: Maria Voigt <maria.voigt@idiv.de>
Date: Sun, 26 Nov 2017 19:37:19 +0100
Subject: [PATCH] initial commit submit scripts for quantile scripts
---
src/validation/idiv2-local-job-diff-future.sh | 14 ++++++++++++++
src/validation/idiv2-local-job-pop-diff.sh | 14 ++++++++++++++
src/validation/idiv2-local-job-pops-future.sh | 12 ++++++++++++
src/validation/idiv2-local-job-resource-diff.sh | 14 ++++++++++++++
src/validation/idiv2-local-job-with-years-sum.sh | 12 ++++++++++++
src/validation/idiv2-local-job-with-years.sh | 12 ++++++++++++
6 files changed, 78 insertions(+)
create mode 100644 src/validation/idiv2-local-job-diff-future.sh
create mode 100644 src/validation/idiv2-local-job-pop-diff.sh
create mode 100644 src/validation/idiv2-local-job-pops-future.sh
create mode 100644 src/validation/idiv2-local-job-resource-diff.sh
create mode 100644 src/validation/idiv2-local-job-with-years-sum.sh
create mode 100644 src/validation/idiv2-local-job-with-years.sh
diff --git a/src/validation/idiv2-local-job-diff-future.sh b/src/validation/idiv2-local-job-diff-future.sh
new file mode 100644
index 0000000..6e4ee16
--- /dev/null
+++ b/src/validation/idiv2-local-job-diff-future.sh
@@ -0,0 +1,14 @@
+#!/bin/bash
+
+source /etc/profile.d/000-modules.sh
+
+module purge
+module load jdk/8 scala/2.11 ammonite
+
+JAVA_OPTS=-Xmx32G \
+ command time -v amm \
+ ~/orangutan_density_distribution/src/validation/quartiles-categorized-future-diff.scala \
+ /work-local/maria/ \
+ /work/voigtma/bootstrap_no_0.1/bootstrap_diff_grid_id_future_output.csv \
+ /data/idiv_kuehl/maria_data/bootstrap/grid_id_all_populations_in_one_mapping.csv \
+ /data/idiv_kuehl/maria_data/bootstrap/populations_2050.csv
diff --git a/src/validation/idiv2-local-job-pop-diff.sh b/src/validation/idiv2-local-job-pop-diff.sh
new file mode 100644
index 0000000..f3fa841
--- /dev/null
+++ b/src/validation/idiv2-local-job-pop-diff.sh
@@ -0,0 +1,14 @@
+#!/bin/bash
+
+source /etc/profile.d/000-modules.sh
+
+module purge
+module load jdk/8 scala/2.11 ammonite
+
+JAVA_OPTS=-Xmx32G \
+ command time -v amm \
+ ~/orangutan_density_distribution/src/validation/quartiles-categorized-diff.scala \
+ /work-local/maria/ \
+ /work/voigtma/bootstrap_no_0.1/bootstrap_diff_grid_id_pop_output.csv \
+ /data/idiv_kuehl/maria_data/bootstrap/grid_id_population_mapping.csv \
+ 1999,2015
diff --git a/src/validation/idiv2-local-job-pops-future.sh b/src/validation/idiv2-local-job-pops-future.sh
new file mode 100644
index 0000000..c3f6bb6
--- /dev/null
+++ b/src/validation/idiv2-local-job-pops-future.sh
@@ -0,0 +1,12 @@
+#!/bin/bash
+
+source /etc/profile.d/000-modules.sh
+
+module purge
+module load jdk/8 scala/2.11 ammonite
+
+JAVA_OPTS=-Xmx32G \
+parallel \
+ --line-buffer \
+ -j10 \
+ 'command time -v amm ~/orangutan_density_distribution/src/validation/quartiles-categorized.scala /work-local/maria/ /work/voigtma/bootstrap_no_0.1/bootstrap_{/.}_2020_output.csv {} 2015' ::: /data/idiv_kuehl/maria_data/bootstrap/populations_2020.csv
diff --git a/src/validation/idiv2-local-job-resource-diff.sh b/src/validation/idiv2-local-job-resource-diff.sh
new file mode 100644
index 0000000..bdce319
--- /dev/null
+++ b/src/validation/idiv2-local-job-resource-diff.sh
@@ -0,0 +1,14 @@
+#!/bin/bash
+
+source /etc/profile.d/000-modules.sh
+
+module purge
+module load jdk/8 scala/2.11 ammonite
+
+JAVA_OPTS=-Xmx32G \
+ command time -v amm \
+ ~/orangutan_density_distribution/src/validation/quartiles-categorized-diff.scala \
+ /work-local/maria/ \
+ /work/voigtma/bootstrap_no_0.1/bootstrap_diff_resource_use_grid.csv \
+ /data/idiv_kuehl/maria_data/bootstrap/resource_use_grid.csv \
+ 1999,2015
diff --git a/src/validation/idiv2-local-job-with-years-sum.sh b/src/validation/idiv2-local-job-with-years-sum.sh
new file mode 100644
index 0000000..646cb92
--- /dev/null
+++ b/src/validation/idiv2-local-job-with-years-sum.sh
@@ -0,0 +1,12 @@
+#!/bin/bash
+
+source /etc/profile.d/000-modules.sh
+
+module purge
+module load jdk/8 scala/2.11 ammonite
+
+JAVA_OPTS=-Xmx32G \
+parallel \
+ --line-buffer \
+ -j10 \
+ 'command time -v amm ~/orangutan_density_distribution/src/validation/quartiles-categorized.scala /work-local/maria/ /work/voigtma/bootstrap_no_0.1_resource_use/bootstrap_abundance_{/.}_output.csv {} 1999,2015' ::: /data/idiv_kuehl/maria_data/bootstrap/resource_use_grid.csv
diff --git a/src/validation/idiv2-local-job-with-years.sh b/src/validation/idiv2-local-job-with-years.sh
new file mode 100644
index 0000000..eb3db92
--- /dev/null
+++ b/src/validation/idiv2-local-job-with-years.sh
@@ -0,0 +1,12 @@
+#!/bin/bash
+
+source /etc/profile.d/000-modules.sh
+
+module purge
+module load jdk/8 scala/2.11 ammonite
+
+JAVA_OPTS=-Xmx32G \
+parallel \
+ --line-buffer \
+ -j10 \
+ 'command time -v amm ~/orangutan_density_distribution/src/validation/quartiles-categorized_mean.scala /work-local/maria/ /work/voigtma/bootstrap_no_0.1_resource_use/bootstrap_{/.}_output.csv {} 1999,2015' ::: /data/idiv_kuehl/maria_data/bootstrap/resource_use_grid.csv
--
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