From dd2f3c5102523ed71713ed7ee33765fee8fe009b Mon Sep 17 00:00:00 2001
From: Maria Voigt <maria.voigt@idiv.de>
Date: Mon, 30 Oct 2017 22:39:33 +0100
Subject: [PATCH] adding province and updating
---
.../grid_mapping_for_resource_use.py | 77 ++++++++++++-------
1 file changed, 50 insertions(+), 27 deletions(-)
diff --git a/src/validation/grid_mapping_for_resource_use.py b/src/validation/grid_mapping_for_resource_use.py
index 092f975..18f126d 100644
--- a/src/validation/grid_mapping_for_resource_use.py
+++ b/src/validation/grid_mapping_for_resource_use.py
@@ -4,10 +4,12 @@ Spyder Editor
# script to prepare the grid with the resource use information
# in the output file we will have a
-# a 1 at the first position if pixel has to be discarded
-# a 2 at the first position if the pixel is considered
+# a 1 at the first position if pixel has to be considered
+# a 2 at the first position if the pixel is discarded
# a 1 at the second position for IDN
# a 2 at the second position for MYS
+# a 10 at the third position for SAB
+# an 11 at the third position for SAW + also for others
# a 0 - 5 at the 3rd position depending on the resource use category
# the grid_id from the 4rth to the 10th position (6 positions)
#
@@ -16,13 +18,12 @@ Spyder Editor
# 0 - absence
# 1 - plantation
# 2 - deforestation
-# 3 - landcover change
-# 4 - logging
-# 5 - primary forest < 750m
-# 6 - primary forest > 750
-# 7 - regrowth
-# 8 - plantations before 2000
-# 9 - other
+# 3 - logging
+# 4 - primary forest < 750m
+# 5 - primary forest > 750
+# 6 - regrowth
+# 7 - plantations before 2000
+# 8 - other
"""
@@ -73,8 +74,11 @@ os.system("gdalwarp \
"""
-absence_path = "/homes/mv39zilo/work/Borneo/data/response/cleaned_data/absence_shape/absence_shape_expanded_22_08_17_repro_res.tif"
-absence = mp.tiff.read_tif(absence_path, 1)
+#absence_path = "/homes/mv39zilo/work/Borneo/data/response/cleaned_data/absence_shape/absence_shape_expanded_22_08_17_repro_res.tif"
+#absence = mp.tiff.read_tif(absence_path, 1)
+
+populations = mp.tiff.read_tif("/homes/mv39zilo/work/Borneo/data/populations_phva/meta_kalsarsab_20002015_diss_no_reintro_repro_res.tif", 1)
+
# input grid with grid_ids as values
@@ -86,15 +90,31 @@ np.unique(resource_use)
country_layer_path = "/homes/mv39zilo/work/Borneo/data/auxiliary_additional_data/Borneo_shape/cleaned_data/Borneo_country_repro_res.tif"
borneo = mp.tiff.read_tif(country_layer_path, 1)
+
+province_layer_path = "/homes/mv39zilo/work/Borneo/data/auxiliary_additional_data/Borneo_shape/cleaned_data/Borneo_province_repro_res.tif"
+borneo_province = mp.tiff.read_tif(province_layer_path, 1)
+np.unique(borneo_province)
+
"""
# format
-1 0 0 0 0 0 000 000
-(1 / 2) 0 (3 / 6) 0 (1-9) 0 700 000
-out/in, MYS/IDN, category,grid_id
+1 0 10 0 000 001
+(1 / 2) (3 / 6) 10-16 (1-9) 700 000
+in/out, MYS/IDN, Province, category, grid_id
+
+in/out
+10000000000
+country
+1000000000
+province
+10000000
+category
+1000000
+grid
+100000
"""
-# pixel is out / out
-resource_grid_1 = np.where(absence == 1, 100000000000, 200000000000)
+# pixel is in / out (in when 1, out when 2)
+resource_grid_1 = np.where(populations != 0, 10000000000, 20000000000)
# country
resource_grid_2 = np.where(borneo == 136, (resource_grid_1 + 3 * 1000000000),
@@ -103,26 +123,29 @@ resource_grid_3 = np.where(borneo == 106, (resource_grid_2 + 6 * 1000000000),
resource_grid_2)
-resource_grid_4 = np.where(resource_use > 0, (resource_grid_3 + resource_use * 10000000),
- resource_grid_3)
-np.unique(resource_grid_4 )
-
+# province
+# excluding Brunei (1-4)
+resource_grid_4 = np.where(borneo_province > 4, (resource_grid_3 + (borneo_province * 10000000)), resource_grid_3)
# now assigning number for each resource use
-
-resource_grid_5 = np.where(grid > 0, (resource_grid_4 + grid),
- resource_grid_4 )
+resource_grid_5 = np.where(resource_use > 0, (resource_grid_4 + resource_use * 1000000),
+ resource_grid_4)
np.unique(resource_grid_5)
+resource_grid_6 = np.where(grid > 0, (resource_grid_5 + grid),
+ resource_grid_5 )
+np.unique(resource_grid_6)
+
+
mp.tiff.write_tif(file_with_srid = "/homes/mv39zilo/work/Borneo/analysis/model_prep_and_running/results/future/grid_with_id_repro_res.tif",
full_output_name = "/homes/mv39zilo/work/Borneo/analysis/model_prep_and_running/results/resource_use/resource_grid_absence_country_category_id.tif",
- data = resource_grid_5,
+ data = resource_grid_6,
dtype = 5)
-# use this in R script "prepare_boot_grid.R"
+# use this in R script "prepare_boot_grid_resource_use.R"
"""
@@ -137,8 +160,8 @@ test = np.where((grid == 0) &
np.sum(test)
mp.tiff.write_tif(file_with_srid = grid_layer_path,
full_output_name = "/homes/mv39zilo/work/Borneo/data/bootstrap/test.tif",
- data = test,
- dtype = 4)
+ data = resource_grid_6,
+ dtype = 5)
"""
# rasterize borneo with info on country or province
--
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