From 7f3949e8b991ffdbb92c22062373c838536d0148 Mon Sep 17 00:00:00 2001
From: Daniel Vedder <daniel.vedder@idiv.de>
Date: Mon, 29 May 2023 00:19:23 +0200
Subject: [PATCH] Added script for runtime profiling
closes #38
---
.gitignore | 3 ++-
Makefile | 7 ++++++-
README.md | 1 +
docs/src/index.md | 6 ++++--
4 files changed, 13 insertions(+), 4 deletions(-)
diff --git a/.gitignore b/.gitignore
index 9427300..368f40d 100644
--- a/.gitignore
+++ b/.gitignore
@@ -1,3 +1,4 @@
TODO.md
docs/planning
-*results*/
\ No newline at end of file
+*results*/
+profile*txt
\ No newline at end of file
diff --git a/Makefile b/Makefile
index 0683312..3de32b7 100644
--- a/Makefile
+++ b/Makefile
@@ -2,7 +2,7 @@ SHELL = /bin/bash
.PHONY: run test docs release install
run:
- # running example simulation
+ # run an example simulation
if [ -d "example_results" ]; then rm -r example_results; fi
./run.jl -o example_results
src/analysis/analyse_nature.R example_results
@@ -19,6 +19,11 @@ docs:
sed -i -e "s/\*Last updated:.*/\*Last updated: ${commit}\*/" docs/src/index.md
cd docs; julia builddocs.jl
+profile:
+ # run and profile an example simulation
+ if [ -d "example_results" ]; then rm -r example_results; fi
+ ./runprofile.jl -o example_results
+
container:
echo "Not yet implemented (#43)"
diff --git a/README.md b/README.md
index 59351c5..7d5f457 100644
--- a/README.md
+++ b/README.md
@@ -61,6 +61,7 @@ If you are on Linux or MacOS, you can also use `make`:
```
> make run # run a simulation with default values
> make test # run the test suite
+> make profile # run and profile a default simulation
> make docs # build the documentation
> make release # create a release
```
diff --git a/docs/src/index.md b/docs/src/index.md
index 3a783f5..f1c9c33 100644
--- a/docs/src/index.md
+++ b/docs/src/index.md
@@ -51,8 +51,6 @@ of parameters):
[core]
configfile = "src/parameters.toml" # location of the configuration file
-landcovermap = "data/landcover_jena.tif" # location of the landcover map
-farmfieldsmap = "data/fields_jena.tif" # location of the field geometry map
outdir = "results" # location and name of the output folder
overwrite = "ask" # overwrite the output directory? (true/false/"ask")
loglevel = "debug" # verbosity level: "debug", "info", "warn"
@@ -62,6 +60,10 @@ seed = 2 # seed value for the RNG (0 -> random value)
startdate = 2022-01-01
enddate = 2022-12-31
+[world]
+landcovermap = "data/landcover_jena.tif" # location of the landcover map
+farmfieldsmap = "data/fields_jena.tif" # location of the field geometry map
+
[farm]
farmmodel = "FieldManager" # which version of the farm model to use (not yet implemented)
--
GitLab