diff --git a/04_Additional_Figs.R b/04_Additional_Figs.R index 5e243096e80d59a74e642ec1e83b606543a1e38e..95b52d4c059e55456d16f9565c33f8820c36b0be 100644 --- a/04_Additional_Figs.R +++ b/04_Additional_Figs.R @@ -197,7 +197,7 @@ create.panel2 <- function(xx, i, tit){ filter(metric %in% c("richness", "alpha")) %>% mutate(with=ifelse(!is.na(with), paste0("OTU Rich (", with, ")"), with)) %>% mutate(with=ifelse(is.na(with), "Eq. OTU (mean)", with))) + - geom_density(aes(value, group=with, col=with), show.legend=FALSE)+ + geom_density(aes(value, group=with, col=with), alpha=0.7, show.legend=FALSE)+ stat_density(aes(x=value, colour=with), geom="line",position="identity") + scale_color_brewer(palette="Dark2", name=NULL) +