From 39b3ddfa781dbddb6cef92ad3914cb2655c57d81 Mon Sep 17 00:00:00 2001
From: Francesco Sabatini <francesco.sabatini@idiv.de>
Date: Mon, 2 Mar 2020 11:26:35 +0100
Subject: [PATCH] modified submit_01b for cluster
---
submit_01b.sh | 8 ++++----
1 file changed, 4 insertions(+), 4 deletions(-)
diff --git a/submit_01b.sh b/submit_01b.sh
index b089bea..55cd087 100644
--- a/submit_01b.sh
+++ b/submit_01b.sh
@@ -9,11 +9,11 @@
#$ -l h_rt=00:30:00:00
#$ -l h_vmem=1G
-#$ -pe smp 8-32
+#$ -pe smp 1-1
#$ -cwd
-#$ -t 1-99
+#$ -t 1-1
module load R
@@ -22,9 +22,9 @@ output=/data/splot/HIDDEN/output/HIDDEN
Rscript \
cli_01b.r \
- --max.inter.t 1 \
+ --max.inter.t 2 \
--chunk.i $SGE_TASK_ID \
- --chunkn 20 \
+ --chunkn 399 \
--nperm 99 \
/data/splot/HIDDEN/species.out.10perc.txt \
/data/splot/HIDDEN/traits.out.10perc.txt \
--
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