From 437897566609245886b89c125e86acb6ab721bf2 Mon Sep 17 00:00:00 2001
From: Francesco Sabatini <francesco.sabatini@idiv.de>
Date: Mon, 17 Aug 2020 10:21:25 +0200
Subject: [PATCH] updated submit
---
submit_01b.sh | 17 +++++++++--------
1 file changed, 9 insertions(+), 8 deletions(-)
diff --git a/submit_01b.sh b/submit_01b.sh
index 5e24dff..c6ffb9f 100644
--- a/submit_01b.sh
+++ b/submit_01b.sh
@@ -6,26 +6,27 @@
#$ -o /work/$USER/$JOB_NAME-$JOB_ID.log
#$ -j y
-#$ -l h_rt=00:60:00:00
+#$ -l h_rt=00:30:00:00
#$ -l h_vmem=2G
-#$ -pe smp 24-32
+#$ -pe smp 12-32
#$ -cwd
+module load GCC/8.3.0
+module load OpenMPI/3.1.4
+module load R/3.6.2
-module load R
-
-output=/data/splot/HIDDEN/output/HIDDEN
+output=/data/splot/HIDDEN/output/HIDDENcov
Rscript \
cli_01b.r \
- --max.inter.t 20 \
+ --max.inter.t 12 \
--chunk.i NA \
--chunkn NA \
- --nperm 499 \
+ --nperm 199 \
--ncores ${NSLOTS:-1} \
- --start.round 1 \
+ --start.round 4 \
--relax.round 4 \
/data/splot/HIDDEN/species.out.10perc.cov.txt \
/data/splot/HIDDEN/traits.out.10perc.cov.txt \
--
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