diff --git a/cli_01b.r b/cli_01b.r index 587a2e1c50b30782a12148a39238bd49599819a0..850936d96cd7ead3d1527f870af88f2ad307b611 100644 --- a/cli_01b.r +++ b/cli_01b.r @@ -88,9 +88,9 @@ cli <- parse_args(parser, positional_arguments = 5) # ------------------------------------------------------------------------------ species.path <- cli$args[1] -traits.path <- cli$args[2] -output <- cli$args[3] -myfunction <- cli$args[4] +traits.path <- cli$args[2] +output <- cli$args[3] +myfunction <- cli$args[4] combinations <- cli$args[5] start.round <- cli$options$start.round start.round <- cli$options$relax.round @@ -105,6 +105,6 @@ ncores <- cli$options$ncores # ------------------------------------------------------------------------------ source("01b_MesobromionCluster.R") - +<<<<<<< HEAD Mesobromion(species.path, traits.path, output, myfunction, combinations, start.round, relax.round, - max.inter.t, chunkn, chunk.i, nperm, ncores) +>>>>>>> 8a43e44028ed18129c0ddc708e41bbedf1cd9177