From 9e52e068b686883be1e44ce6d9447a60d4c63f30 Mon Sep 17 00:00:00 2001
From: Francesco Sabatini <francesco.sabatini@idiv.de>
Date: Tue, 24 Nov 2020 15:14:58 +0100
Subject: [PATCH] aligned functions to cluster
---
code/A98_PredictorsExtract.R | 3 ++-
code/submit-A98-array.sh | 2 +-
2 files changed, 3 insertions(+), 2 deletions(-)
diff --git a/code/A98_PredictorsExtract.R b/code/A98_PredictorsExtract.R
index 7af6d9f..ace4faa 100644
--- a/code/A98_PredictorsExtract.R
+++ b/code/A98_PredictorsExtract.R
@@ -16,7 +16,8 @@ PredExtr <- function(x.shp, myfunction=NA, output=NA,
require(doParallel)
require(raster)
require(rgeos)
- require(rgdal)
+ require(rgdal)
+ require(geosphere)
print(paste("Loading", typp, "data :", toextract))
print(paste("output will be:", output))
diff --git a/code/submit-A98-array.sh b/code/submit-A98-array.sh
index 8a82bfd..f69e1bb 100644
--- a/code/submit-A98-array.sh
+++ b/code/submit-A98-array.sh
@@ -32,6 +32,6 @@ Rscript \
--chunk.i "$SGE_TASK_ID" \
--chunkn 99 \
/data/splot/_data_splot3/header.shp.shp \
- NA \
+ robust.mean \
"$output" \
"$filename"
--
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