diff --git a/readme b/readme index 343774b48f0ebdaef6be78dc7628007bfe927ec1..56f062cc9320f0e054e3ece05891d1d8d3a22b4d 100644 --- a/readme +++ b/readme @@ -1,7 +1,17 @@ -1. run dataSync on dir containing compressed data (.tgz suffix) --> should output a cleaned table containing light, track and animalData --> should also produce a compressed version of the table +1. run dataSync.py +2. Choose block-configuration or other key for information how to modify block-configuration! + > looks for ".tgz" to extract [optional] + > merges all "unit-X" files + > merges with light, track and species data + > writes one huge cleaned table + compressed tgz + > runs dataFilter.py + > writes filtered table + compressed tgz + > runs updateGitIgnore.sh + +You can also filter data independently, if you don't want to process everything again [takes quite long] or tweak some filter parameters. +Run dataFilter.py for Usage instructions. + Optional: get time of last tracking-event per unit: @@ -17,7 +27,3 @@ print tags in tagfile which length deviate: update gitignore to not add large files (>50M) to git repo: updateGitIgnore.sh - -filterCooloff.py data 10 --> only count tracks with difference of 10 seconds inbetween! (this greatly reduces the size) --> this script is called automatically from dataSync.py but can be invoked manually if you want t o change the coolOff phase \ No newline at end of file