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Commit 005fb3be authored by Francesco Sabatini's avatar Francesco Sabatini
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Proceeded with 03_backbone. Fixed fungi, families, iteration1-3

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...@@ -17,6 +17,17 @@ knitr::opts_chunk$set(echo = TRUE) ...@@ -17,6 +17,17 @@ knitr::opts_chunk$set(echo = TRUE)
5) Link to EUNIS cross-link table, and assign Faber-Langedon Formation (FMS) 5) Link to EUNIS cross-link table, and assign Faber-Langedon Formation (FMS)
6) Assign plot elevation using external sources (FMS) 6) Assign plot elevation using external sources (FMS)
7) Add GIVD codes 7) Add GIVD codes
8) filter(`Taxon group`!="Mushroom") from DT0 (There are also other mushroom species not correctly tagged...e.g. all Mycena species in NL Dataset), exclude also species in these genera:
mushroom <- c("Mycena", "Boletus", "Russula","Calocybe","Collybia","Amanita","Amanitopsis","Coprinus",
"Galerina","Geoglossum","Hebeloma","Hydnum","Lactarius","Leucocarpia","Naucoria","Otidea","Polyporus",
"Sarcodom","Sarcoscyphus","Scleroderma","Stropharia","Tylopilus","Typhula", "Calyptella", "Chrysopsora", "Lacrymaria", "Dermoloma",
"Alnicola", "Amanitina", "Bovista", "Cheilymenia","Clavulinopsis", "Clitocybe", "Entoloma", "Geaster", "Inocybe",
"Laccaria", "Laetiporus", "Lepista", "Macrolepiota", "Macrolepis", "Marasmius", "Panaeolus", "Psathyrella", "Psilocybe",
"Rickenella", "Sarcoscypha", "Vascellum")
plots to delete from: (GIVD / NA-CA-004) (see email from Laura Boisver) plots to delete from: (GIVD / NA-CA-004) (see email from Laura Boisver)
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