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am0ebe authored
Change data structure: ecotrack |_ in |_ out ecolux |_ in |_ out > Only ever calc all blox. More finegrained analysis can be done using the block column on this table. > change conf.json > extract function temp_add_means_and_time_of_day from initTempData > print number of filtered temp lines > print number of removed tags > [edgecase] add NA to temp cols if close to end of configuration time window > typo: rm tag_info and unknown_tag files
am0ebe authoredChange data structure: ecotrack |_ in |_ out ecolux |_ in |_ out > Only ever calc all blox. More finegrained analysis can be done using the block column on this table. > change conf.json > extract function temp_add_means_and_time_of_day from initTempData > print number of filtered temp lines > print number of removed tags > [edgecase] add NA to temp cols if close to end of configuration time window > typo: rm tag_info and unknown_tag files
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readme 1.02 KiB
1. run dataSync.py 2. Choose block-configuration [or press other key for information how to modify block-configuration!] > looks for ".tgz" to extract [optional] > merges all "unit-X" files > merges with light, track, temperature and species data > writes one huge cleaned table + compressed tgz > runs dataFilter.py > writes filtered table + compressed tgz > runs updateGitIgnore.sh You can also filter data independently, if you don't want to process everything again [takes quite long] or tweak some filter parameters. Run dataFilter.py for Usage instructions. Optional: get time of last tracking-event per unit: source getLastDates.sh cd block-I/01-raw getLastDateAllUnits print information about known and unknown tags and detections unknowntags.sh ecolux/all/02-inspect write number of unkown tags along with their occurrences to file: unknowntags.sh ecotrack/II/02-inspect list print tags in tagfile which length deviate: checkTagLengths.sh block-II/tags2 configure repo to ignore large files: updateGitIgnore.sh