unknowntags.sh: print infos to tags and detection (total,known,unknown) or...

unknowntags.sh: print infos to tags and detection (total,known,unknown) or print list of all unknown tags

unknowntags.sh

 #!/bin/bash
 if (( $# < 1 )); then 
-	echo "Print number of unique unknowntags"
-	echo "Usage: $0 ./block-I/02-inspect/dataFile"
+	echo "Usage:"
+	echo "1. Print Tag/Detection-Info"
+	echo "$0 ./block-I/02-inspect/dataFile"
+	echo ""
+	echo "2. Print list of unknown tags"
+	echo "$0 ./block-I/02-inspect/dataFile list"
 	exit
 fi
 
-grep X $1 | cut -d',' -f8 | sort | uniq | wc -l
+COL_TAG=9
+HEADER_SIZE=`grep "#" "$1" | wc -l`
 
+function printList(){
+	echo "Unknown Tags VVV"
+	grep -v '#' "$1" | cut -d',' -f"$COL_TAG"- "$1" | grep "NA" | cut -d',' -f1 | sort | uniq
+	echo "Unknown Tags /\\/\\"
+}
 
-# if (( "$#" < 2 )); then
-# 	echo "Usage: this data.csv newtagFile"
-# 	echo "1. searches for unkown tags ('X') and saves them in a list named unknownTags"
-# 	echo "2. compares these tags, with the tags from tagFile"
-# 	echo "If anything matches, the beetle/tag must've been in the unit!"
-# 	exit 1
-# fi
-	
-# while IFS= read -r line
-# do
-# 	grep "$line" $unknownTags
-# done < "$2"
+function printInfo() {
+	echo "## Tags"
+	tag_total=`cut -d',' -f"$COL_TAG" "$1" | sort | uniq | wc -l`
+	tag_total=$(($tag_total-$HEADER_SIZE))
+	tag_known=`cut -d',' -f"$COL_TAG"- "$1" | grep -v "NA" | cut -d',' -f1 | sort | uniq | wc -l`
+	tag_unknown=$(($tag_total-$tag_known))
+
+	echo "  total: $tag_total"
+	echo "  known: $tag_known"
+	echo "unknown: $tag_unknown"
+	echo ""
+
+	echo "## Detections"
+	detection_total=`wc -l "$1" | cut -d" " -f1`
+	detection_total=$(($detection_total-$HEADER_SIZE))
+	detection_known=`cut -d',' -f"$COL_TAG"- "$1" | grep -v "NA" | cut -d',' -f1 | wc -l`
+	detection_unknown=$(($detection_total-$detection_known))
+
+	echo "  total: $detection_total"
+	echo "  known: $detection_known"
+	echo "unknown: $detection_unknown"
+}
+
+if (( $# == 1 )); then
+	printInfo $1
+else
+	printList $1
+fi